Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC007787.1-201ENST00000588095 1583 ntBASIC12.81□□□□□ -0.36
CTSDP07339 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CTSDP07339 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CTSDP07339 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.81□□□□□ -0.36
CTSDP07339 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CTSDP07339 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 MBLAC2-202ENST00000514906 1936 ntBASIC12.8□□□□□ -0.36
CTSDP07339 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CTSDP07339 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.8□□□□□ -0.36
CTSDP07339 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CTSDP07339 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CTSDP07339 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CTSDP07339 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 MIR346-201ENST00000362234 95 ntBASIC12.8□□□□□ -0.36
CTSDP07339 TFAMP1-201ENST00000412727 736 ntBASIC12.8□□□□□ -0.36
CTSDP07339 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.8□□□□□ -0.36
CTSDP07339 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.8□□□□□ -0.36
CTSDP07339 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.8□□□□□ -0.36
CTSDP07339 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.8□□□□□ -0.36
CTSDP07339 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.8□□□□□ -0.36
CTSDP07339 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC12.8□□□□□ -0.36
CTSDP07339 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.8□□□□□ -0.36
CTSDP07339 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.8□□□□□ -0.36
CTSDP07339 AC064836.3-201ENST00000607928 673 ntBASIC12.8□□□□□ -0.36
CTSDP07339 AC120114.3-201ENST00000611923 658 ntBASIC12.8□□□□□ -0.36
CTSDP07339 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CTSDP07339 AL645728.2-202ENST00000641679 227 ntBASIC12.8□□□□□ -0.36
CTSDP07339 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 IL9RP2-201ENST00000423948 1312 ntBASIC12.8□□□□□ -0.36
CTSDP07339 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.8□□□□□ -0.36
CTSDP07339 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
CTSDP07339 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CTSDP07339 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.79□□□□□ -0.36
CTSDP07339 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.79□□□□□ -0.36
CTSDP07339 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.79□□□□□ -0.36
CTSDP07339 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.79□□□□□ -0.36
CTSDP07339 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.79□□□□□ -0.36
CTSDP07339 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.79□□□□□ -0.36
CTSDP07339 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CTSDP07339 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CTSDP07339 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 AP000842.3-202ENST00000569238 1080 ntBASIC12.79□□□□□ -0.36
CTSDP07339 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.79□□□□□ -0.36
CTSDP07339 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CTSDP07339 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.79□□□□□ -0.36
CTSDP07339 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.79□□□□□ -0.36
CTSDP07339 REXO1L4P-201ENST00000605109 1937 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms