Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 OR2R1P-201ENST00000441404 914 ntBASIC19.68■□□□□ 0.74
COL5A2P05997 LYPLA2P1-203ENST00000447689 696 ntBASIC19.68■□□□□ 0.74
COL5A2P05997 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.68■□□□□ 0.74
COL5A2P05997 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC19.68■□□□□ 0.74
COL5A2P05997 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC19.68■□□□□ 0.74
COL5A2P05997 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 SIGLEC18P-201ENST00000602271 909 ntBASIC19.68■□□□□ 0.74
COL5A2P05997 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 AC023090.2-201ENST00000625182 2110 ntBASIC19.68■□□□□ 0.74
COL5A2P05997 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.68■□□□□ 0.74
COL5A2P05997 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 LILRP1-201ENST00000444199 1370 ntBASIC19.68■□□□□ 0.74
COL5A2P05997 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.68■□□□□ 0.74
COL5A2P05997 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COL5A2P05997 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC19.67■□□□□ 0.74
COL5A2P05997 AL592076.1-201ENST00000424448 303 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 TSPY25P-201ENST00000429463 745 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 RPSAP15-201ENST00000448168 861 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.67■□□□□ 0.74
COL5A2P05997 AL157792.1-201ENST00000488281 530 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 AC026410.1-201ENST00000507366 1101 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC19.67■□□□□ 0.74
COL5A2P05997 AC027237.1-201ENST00000560942 655 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC19.67■□□□□ 0.74
COL5A2P05997 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC19.67■□□□□ 0.74
COL5A2P05997 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 KRT18P9-201ENST00000604826 1300 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.67■□□□□ 0.74
COL5A2P05997 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.67■□□□□ 0.74
COL5A2P05997 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC19.67■□□□□ 0.74
COL5A2P05997 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC19.67■□□□□ 0.74
COL5A2P05997 AC090502.4-201ENST00000551714 1386 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL5A2P05997 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.67■□□□□ 0.74
COL5A2P05997 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.67■□□□□ 0.74
COL5A2P05997 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COL5A2P05997 AL807761.2-201ENST00000422849 729 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC19.67■□□□□ 0.74
COL5A2P05997 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC19.67■□□□□ 0.74
COL5A2P05997 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
COL5A2P05997 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC19.67■□□□□ 0.74
COL5A2P05997 AC005041.3-201ENST00000606287 649 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 AC107464.3-201ENST00000609172 737 ntBASIC19.67■□□□□ 0.74
COL5A2P05997 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COL5A2P05997 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC19.66■□□□□ 0.74
COL5A2P05997 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
COL5A2P05997 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.66■□□□□ 0.74
COL5A2P05997 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.66■□□□□ 0.74
COL5A2P05997 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COL5A2P05997 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.66■□□□□ 0.74
COL5A2P05997 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC19.66■□□□□ 0.74
COL5A2P05997 BANF1P3-201ENST00000412556 261 ntBASIC19.66■□□□□ 0.74
COL5A2P05997 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC19.66■□□□□ 0.74
COL5A2P05997 AC010234.1-201ENST00000494599 870 ntBASIC19.66■□□□□ 0.74
COL5A2P05997 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COL5A2P05997 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.66■□□□□ 0.74
COL5A2P05997 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC19.66■□□□□ 0.74
COL5A2P05997 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms