Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
KDM4BO94953 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 MIR346-201ENST00000362234 95 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 AC004987.2-201ENST00000395959 1148 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.6□□□□□ -0.23
KDM4BO94953 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.6□□□□□ -0.23
KDM4BO94953 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.6□□□□□ -0.23
KDM4BO94953 ACTG1P14-201ENST00000446382 1122 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 SPDYE11-202ENST00000450699 704 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
KDM4BO94953 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.6□□□□□ -0.23
KDM4BO94953 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.6□□□□□ -0.23
KDM4BO94953 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 RNA5SP410-201ENST00000516285 106 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.6□□□□□ -0.23
KDM4BO94953 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.6□□□□□ -0.23
KDM4BO94953 KRT8P23-201ENST00000560090 1207 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 AP000842.3-202ENST00000569238 1080 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 SPDYE9P-201ENST00000570642 692 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 AC026120.1-201ENST00000611536 926 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 SPDYE10P-202ENST00000612005 668 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 SPDYE8P-202ENST00000612377 668 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.6□□□□□ -0.23
KDM4BO94953 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.6□□□□□ -0.23
KDM4BO94953 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
KDM4BO94953 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.6□□□□□ -0.23
KDM4BO94953 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.6□□□□□ -0.23
KDM4BO94953 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KDM4BO94953 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.6□□□□□ -0.23
KDM4BO94953 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KDM4BO94953 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.6□□□□□ -0.23
KDM4BO94953 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.6□□□□□ -0.23
KDM4BO94953 REXO1L1P-202ENST00000608646 1974 ntBASIC13.6□□□□□ -0.23
KDM4BO94953 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KDM4BO94953 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.59□□□□□ -0.23
KDM4BO94953 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.59□□□□□ -0.23
KDM4BO94953 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
KDM4BO94953 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.59□□□□□ -0.23
KDM4BO94953 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
KDM4BO94953 BNIP3P1-202ENST00000550043 1585 ntBASIC13.59□□□□□ -0.23
KDM4BO94953 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.59□□□□□ -0.23
KDM4BO94953 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.59□□□□□ -0.23
KDM4BO94953 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.59□□□□□ -0.23
KDM4BO94953 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.59□□□□□ -0.23
KDM4BO94953 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
KDM4BO94953 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.59□□□□□ -0.23
KDM4BO94953 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 RPS8P6-201ENST00000426177 609 ntBASIC13.59□□□□□ -0.23
KDM4BO94953 SPCS2P4-201ENST00000436160 681 ntBASIC13.59□□□□□ -0.23
KDM4BO94953 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.59□□□□□ -0.23
KDM4BO94953 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.59□□□□□ -0.23
KDM4BO94953 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.59□□□□□ -0.23
KDM4BO94953 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.59□□□□□ -0.23
KDM4BO94953 LINC01225-203ENST00000563550 1244 ntBASIC13.59□□□□□ -0.23
KDM4BO94953 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.59□□□□□ -0.23
KDM4BO94953 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.59□□□□□ -0.23
KDM4BO94953 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.59□□□□□ -0.23
KDM4BO94953 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.59□□□□□ -0.23
KDM4BO94953 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.59□□□□□ -0.23
KDM4BO94953 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.59□□□□□ -0.23
KDM4BO94953 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.59□□□□□ -0.23
KDM4BO94953 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KDM4BO94953 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms