Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
HMX3A6NHT5 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
HMX3A6NHT5 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 AC004945.1-201ENST00000416738 983 ntBASIC13.4□□□□□ -0.26
HMX3A6NHT5 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 EMBP1-201ENST00000458200 901 ntBASIC13.4□□□□□ -0.26
HMX3A6NHT5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 CICP16-201ENST00000502609 2813 ntBASIC13.4□□□□□ -0.26
HMX3A6NHT5 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.4□□□□□ -0.26
HMX3A6NHT5 AC020658.7-201ENST00000624274 2442 ntBASIC13.4□□□□□ -0.26
HMX3A6NHT5 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HMX3A6NHT5 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HMX3A6NHT5 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
HMX3A6NHT5 AC114271.1-201ENST00000612689 2813 ntBASIC13.4□□□□□ -0.27
HMX3A6NHT5 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
HMX3A6NHT5 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HMX3A6NHT5 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HMX3A6NHT5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.39□□□□□ -0.27
HMX3A6NHT5 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.39□□□□□ -0.27
HMX3A6NHT5 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.39□□□□□ -0.27
HMX3A6NHT5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC13.39□□□□□ -0.27
HMX3A6NHT5 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HMX3A6NHT5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms