Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
HFM1A2PYH4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HFM1A2PYH4 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HFM1A2PYH4 AC006033.1-201ENST00000440505 426 ntBASIC22.33■■□□□ 1.17
HFM1A2PYH4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC22.33■■□□□ 1.17
HFM1A2PYH4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HFM1A2PYH4 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HFM1A2PYH4 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
HFM1A2PYH4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HFM1A2PYH4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HFM1A2PYH4 LINC01101-201ENST00000622953 1884 ntBASIC22.33■■□□□ 1.17
HFM1A2PYH4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.16
HFM1A2PYH4 HARS-202ENST00000415192 1401 ntTSL 2 BASIC22.33■■□□□ 1.16
HFM1A2PYH4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HFM1A2PYH4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HFM1A2PYH4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
HFM1A2PYH4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC22.33■■□□□ 1.16
HFM1A2PYH4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HFM1A2PYH4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
HFM1A2PYH4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 BTBD6P1-201ENST00000412176 1267 ntBASIC22.32■■□□□ 1.16
HFM1A2PYH4 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 AGER-214ENST00000538695 487 ntTSL 2 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC22.32■■□□□ 1.16
HFM1A2PYH4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 AL590440.2-201ENST00000641973 1595 ntBASIC22.32■■□□□ 1.16
HFM1A2PYH4 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HFM1A2PYH4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC22.32■■□□□ 1.16
HFM1A2PYH4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 BRWD1P1-201ENST00000401091 371 ntBASIC22.31■■□□□ 1.16
HFM1A2PYH4 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 AC132192.2-201ENST00000596206 1147 ntBASIC22.31■■□□□ 1.16
HFM1A2PYH4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 AC007292.2-201ENST00000593524 1812 ntBASIC22.31■■□□□ 1.16
HFM1A2PYH4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HFM1A2PYH4 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
HFM1A2PYH4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC22.3■■□□□ 1.16
HFM1A2PYH4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 AJ011931.1-201ENST00000618749 2492 ntBASIC22.3■■□□□ 1.16
HFM1A2PYH4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC22.3■■□□□ 1.16
HFM1A2PYH4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HFM1A2PYH4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms