Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AC026150.2-201ENST00000564693 1156 ntBASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AL691403.2-201ENST00000618460 490 ntBASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AC009093.7-201ENST00000623853 1223 ntBASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HHLA3Q9XRX5 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 DNAJB3-202ENST00000449667 1266 ntBASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 AC023511.2-201ENST00000618803 211 ntBASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 AL122018.1-201ENST00000446607 2310 ntBASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
HHLA3Q9XRX5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.31□□□□□ -0.6
HHLA3Q9XRX5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
HHLA3Q9XRX5 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HHLA3Q9XRX5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.31□□□□□ -0.6
HHLA3Q9XRX5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC11.31□□□□□ -0.6
HHLA3Q9XRX5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
HHLA3Q9XRX5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC11.31□□□□□ -0.6
HHLA3Q9XRX5 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms