Protein–RNA interactions for Protein: Q9UN72

PCDHA7, Protocadherin alpha-7, humanhuman

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA7Q9UN72 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHA7Q9UN72 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHA7Q9UN72 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.46■□□□□ 0.38
PCDHA7Q9UN72 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
PCDHA7Q9UN72 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDHA7Q9UN72 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
PCDHA7Q9UN72 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.46■□□□□ 0.38
PCDHA7Q9UN72 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
PCDHA7Q9UN72 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 TSSK5P-201ENST00000423978 907 ntBASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 AC114501.2-201ENST00000439631 535 ntBASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 AC093028.1-201ENST00000622998 982 ntBASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 AC068587.6-202ENST00000641839 5619 ntBASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHA7Q9UN72 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 AL157414.3-201ENST00000624276 1954 ntBASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 GAPDHP40-201ENST00000505218 1006 ntBASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 AL158211.3-201ENST00000607385 239 ntBASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 AL391069.4-201ENST00000609583 481 ntBASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 AC113367.3-201ENST00000508316 1912 ntBASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 AP001267.2-201ENST00000532619 2086 ntBASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.44■□□□□ 0.38
PCDHA7Q9UN72 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC17.43■□□□□ 0.38
PCDHA7Q9UN72 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA7Q9UN72 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA7Q9UN72 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PCDHA7Q9UN72 BX640514.1-201ENST00000583223 1918 ntBASIC17.43■□□□□ 0.38
PCDHA7Q9UN72 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCDHA7Q9UN72 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms