Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 AL138828.2-201ENST00000615812 383 ntBASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 AC015656.1-201ENST00000624209 3578 ntBASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.83□□□□□ -0.04
CNOT11Q9UKZ1 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 FLJ16779-201ENST00000612722 7638 ntBASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 AC117489.1-201ENST00000625169 3217 ntBASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 PCDHA3-202ENST00000532566 4594 ntBASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 AC011467.4-201ENST00000594891 528 ntBASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 AC026979.3-201ENST00000607315 403 ntBASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 AL589739.1-201ENST00000607720 493 ntBASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 CETN4P-206ENST00000642099 2168 ntBASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNOT11Q9UKZ1 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 BASP1P1-201ENST00000430708 665 ntBASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 BCRP1-201ENST00000444246 691 ntBASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 AC027369.6-201ENST00000525520 931 ntBASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 SPCS2P1-201ENST00000561636 679 ntBASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 MIR4313-201ENST00000580760 101 ntBASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 AL390754.1-201ENST00000619088 582 ntBASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNOT11Q9UKZ1 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 123.3 ms