Protein–RNA interactions for Protein: Q9UI42

CPA4, Carboxypeptidase A4, humanhuman

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4Q9UI42 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CPA4Q9UI42 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 AC020910.5-201ENST00000623668 1865 ntBASIC17.29■□□□□ 0.36
CPA4Q9UI42 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.29■□□□□ 0.36
CPA4Q9UI42 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 MBLAC2-202ENST00000514906 1936 ntBASIC17.29■□□□□ 0.36
CPA4Q9UI42 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 CROCCP1-201ENST00000426910 5675 ntBASIC17.29■□□□□ 0.36
CPA4Q9UI42 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CPA4Q9UI42 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.29■□□□□ 0.36
CPA4Q9UI42 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 CDC23-208ENST00000505120 455 ntTSL 3 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 AC132192.2-201ENST00000596206 1147 ntBASIC17.28■□□□□ 0.36
CPA4Q9UI42 MIR6842-201ENST00000612539 65 ntBASIC17.28■□□□□ 0.36
CPA4Q9UI42 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 CYP51A1P3-201ENST00000400072 1428 ntBASIC17.28■□□□□ 0.36
CPA4Q9UI42 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 MST1L-201ENST00000442552 2185 ntBASIC17.28■□□□□ 0.36
CPA4Q9UI42 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.28■□□□□ 0.36
CPA4Q9UI42 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CPA4Q9UI42 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CPA4Q9UI42 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CPA4Q9UI42 OR2K2-202ENST00000374428 1038 ntBASIC17.27■□□□□ 0.36
CPA4Q9UI42 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CPA4Q9UI42 AC010141.1-201ENST00000411585 623 ntBASIC17.27■□□□□ 0.36
CPA4Q9UI42 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CPA4Q9UI42 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms