Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.46■□□□□ 0.23
CNTN3Q9P232 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.46■□□□□ 0.23
CNTN3Q9P232 ENPP7P14-201ENST00000621765 1040 ntBASIC16.46■□□□□ 0.23
CNTN3Q9P232 AC006453.4-201ENST00000636949 1252 ntBASIC16.46■□□□□ 0.23
CNTN3Q9P232 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTN3Q9P232 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTN3Q9P232 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.46■□□□□ 0.23
CNTN3Q9P232 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTN3Q9P232 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTN3Q9P232 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CNTN3Q9P232 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
CNTN3Q9P232 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTN3Q9P232 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTN3Q9P232 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CNTN3Q9P232 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTN3Q9P232 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTN3Q9P232 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.46■□□□□ 0.23
CNTN3Q9P232 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.46■□□□□ 0.23
CNTN3Q9P232 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CNTN3Q9P232 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CNTN3Q9P232 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CNTN3Q9P232 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
CNTN3Q9P232 AL157414.3-201ENST00000624276 1954 ntBASIC16.46■□□□□ 0.22
CNTN3Q9P232 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CNTN3Q9P232 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 AL583810.1-201ENST00000553344 1045 ntBASIC16.45■□□□□ 0.22
CNTN3Q9P232 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 ECM1P1-201ENST00000604092 1279 ntBASIC16.45■□□□□ 0.22
CNTN3Q9P232 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CNTN3Q9P232 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.45■□□□□ 0.22
CNTN3Q9P232 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.44■□□□□ 0.22
CNTN3Q9P232 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 PPT1-215ENST00000641471 2368 ntBASIC16.44■□□□□ 0.22
CNTN3Q9P232 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.44■□□□□ 0.22
CNTN3Q9P232 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CNTN3Q9P232 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.44■□□□□ 0.22
CNTN3Q9P232 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.44■□□□□ 0.22
CNTN3Q9P232 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.44■□□□□ 0.22
CNTN3Q9P232 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms