Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL20A1Q9P218 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.22■□□□□ 0.35
COL20A1Q9P218 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL20A1Q9P218 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL20A1Q9P218 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL20A1Q9P218 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL20A1Q9P218 GPAA1P2-201ENST00000417923 928 ntBASIC17.21■□□□□ 0.35
COL20A1Q9P218 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 HIST2H2BB-201ENST00000449108 381 ntBASIC17.21■□□□□ 0.35
COL20A1Q9P218 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL20A1Q9P218 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 AC104982.3-201ENST00000581995 514 ntBASIC17.21■□□□□ 0.35
COL20A1Q9P218 AL008638.5-201ENST00000623814 1298 ntBASIC17.21■□□□□ 0.35
COL20A1Q9P218 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
COL20A1Q9P218 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL20A1Q9P218 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
COL20A1Q9P218 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.21■□□□□ 0.35
COL20A1Q9P218 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC17.21■□□□□ 0.34
COL20A1Q9P218 AC126365.1-201ENST00000578585 1514 ntBASIC17.21■□□□□ 0.34
COL20A1Q9P218 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
COL20A1Q9P218 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
COL20A1Q9P218 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 PPT1-215ENST00000641471 2368 ntBASIC17.2■□□□□ 0.34
COL20A1Q9P218 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 FTLP10-202ENST00000505798 471 ntBASIC17.2■□□□□ 0.34
COL20A1Q9P218 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 AC009093.2-202ENST00000620513 2079 ntBASIC17.2■□□□□ 0.34
COL20A1Q9P218 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
COL20A1Q9P218 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
COL20A1Q9P218 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 MIR663B-201ENST00000408361 115 ntBASIC17.19■□□□□ 0.34
COL20A1Q9P218 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 MIR4683-201ENST00000579659 81 ntBASIC17.19■□□□□ 0.34
COL20A1Q9P218 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
COL20A1Q9P218 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.19■□□□□ 0.34
COL20A1Q9P218 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms