Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 PAWRP1-201ENST00000451083 565 ntBASIC18.38■□□□□ 0.53
RTN4Q9NQC3 AC132008.2-207ENST00000454517 770 ntBASIC18.38■□□□□ 0.53
RTN4Q9NQC3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 LRRC37A7P-201ENST00000583900 2759 ntBASIC18.38■□□□□ 0.53
RTN4Q9NQC3 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 MROH4P-201ENST00000431302 1578 ntBASIC18.38■□□□□ 0.53
RTN4Q9NQC3 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTN4Q9NQC3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 AL590326.2-201ENST00000625139 305 ntBASIC18.37■□□□□ 0.53
RTN4Q9NQC3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 AP000550.4-202ENST00000639755 178 ntBASIC18.37■□□□□ 0.53
RTN4Q9NQC3 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 AL031731.1-201ENST00000642131 2094 ntBASIC18.37■□□□□ 0.53
RTN4Q9NQC3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTN4Q9NQC3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 KRT16P4-201ENST00000453883 522 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 AC106795.1-205ENST00000512851 1056 ntBASIC18.36■□□□□ 0.53
RTN4Q9NQC3 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.36■□□□□ 0.53
RTN4Q9NQC3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms