Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.08□□□□□ -0.16
HMG20AQ9NP66 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 OR7E47P-204ENST00000575924 449 ntBASIC14.07□□□□□ -0.16
HMG20AQ9NP66 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 AC117500.6-201ENST00000624871 588 ntBASIC14.07□□□□□ -0.16
HMG20AQ9NP66 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 AL591122.2-201ENST00000624125 1853 ntBASIC14.07□□□□□ -0.16
HMG20AQ9NP66 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.07□□□□□ -0.16
HMG20AQ9NP66 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 AC105206.1-202ENST00000314927 2368 ntBASIC14.07□□□□□ -0.16
HMG20AQ9NP66 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.07□□□□□ -0.16
HMG20AQ9NP66 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 AC118758.2-201ENST00000614242 2813 ntBASIC14.06□□□□□ -0.16
HMG20AQ9NP66 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 AC012569.1-201ENST00000591191 1524 ntBASIC14.06□□□□□ -0.16
HMG20AQ9NP66 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.06□□□□□ -0.16
HMG20AQ9NP66 SLC4A1APP2-201ENST00000424054 1259 ntBASIC14.06□□□□□ -0.16
HMG20AQ9NP66 AL450487.1-201ENST00000426799 995 ntBASIC14.06□□□□□ -0.16
HMG20AQ9NP66 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 FAM185BP-201ENST00000443595 716 ntBASIC14.06□□□□□ -0.16
HMG20AQ9NP66 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 AL773604.1-201ENST00000617417 272 ntBASIC14.06□□□□□ -0.16
HMG20AQ9NP66 AL031008.1-201ENST00000619963 541 ntBASIC14.06□□□□□ -0.16
HMG20AQ9NP66 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.06□□□□□ -0.16
HMG20AQ9NP66 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 133.5 ms