Protein–RNA interactions for Protein: Q9H5V9

CXorf56, UPF0428 protein CXorf56, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf56Q9H5V9 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 AC012640.2-201ENST00000561606 901 ntBASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 AC005593.1-201ENST00000624894 515 ntBASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 FANCC-210ENST00000490972 2709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 AC004899.2-201ENST00000622993 3860 ntBASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CXorf56Q9H5V9 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 AC007967.3-201ENST00000434308 558 ntBASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.11■□□□□ 0.01
CXorf56Q9H5V9 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CXorf56Q9H5V9 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms