Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC18.08■□□□□ 0.48
RNF41Q9H4P4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 AC023157.3-201ENST00000619086 2088 ntBASIC18.07■□□□□ 0.48
RNF41Q9H4P4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 HLA-K-203ENST00000430151 1046 ntBASIC18.07■□□□□ 0.48
RNF41Q9H4P4 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 AL603764.1-201ENST00000636452 321 ntBASIC18.07■□□□□ 0.48
RNF41Q9H4P4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 AP000845.1-201ENST00000581677 2131 ntBASIC18.07■□□□□ 0.48
RNF41Q9H4P4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RNF41Q9H4P4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 KRT43P-201ENST00000434019 910 ntBASIC18.06■□□□□ 0.48
RNF41Q9H4P4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 AC022616.1-201ENST00000518688 554 ntBASIC18.06■□□□□ 0.48
RNF41Q9H4P4 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 LRRC59-203ENST00000576448 1531 ntBASIC18.06■□□□□ 0.48
RNF41Q9H4P4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RNF41Q9H4P4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms