Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 AL135744.1-201ENST00000565098 629 ntBASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 AP000842.3-202ENST00000569238 1080 ntBASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 AC013731.1-201ENST00000604340 883 ntBASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC7.9□□□□□ -1.14
KRTAP3-1Q9BYR8 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
KRTAP3-1Q9BYR8 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC010327.5-201ENST00000586923 3061 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC015656.1-201ENST00000624209 3578 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC104109.2-201ENST00000602919 1418 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC090774.4-201ENST00000578888 1372 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 TMEM138-202ENST00000381787 1205 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AL355306.1-201ENST00000415580 579 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC007967.2-201ENST00000432613 625 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 VN1R48P-201ENST00000448149 1036 ntBASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC7.89□□□□□ -1.15
KRTAP3-1Q9BYR8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC7.89□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms