Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RPAP1Q9BWH6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 BRWD1P1-201ENST00000401091 371 ntBASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 GPR39-203ENST00000622084 900 ntTSL 5 BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
RPAP1Q9BWH6 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 AC148477.4-201ENST00000613430 1793 ntBASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RPAP1Q9BWH6 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 CNN2P8-201ENST00000421872 913 ntBASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 AC099548.2-209ENST00000480264 625 ntBASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 AC009542.2-202ENST00000619004 1067 ntBASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.57■□□□□ 0.56
RPAP1Q9BWH6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 AC026954.1-201ENST00000429771 1293 ntBASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 RPL8-205ENST00000527914 551 ntTSL 3 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.56■□□□□ 0.56
RPAP1Q9BWH6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms