Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC17.52■□□□□ 0.4
CCDC94Q9BW85 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC94Q9BW85 CYP4F24P-201ENST00000586049 1580 ntBASIC17.52■□□□□ 0.39
CCDC94Q9BW85 AL136982.4-201ENST00000437689 1740 ntBASIC17.52■□□□□ 0.39
CCDC94Q9BW85 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC94Q9BW85 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCDC94Q9BW85 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC17.52■□□□□ 0.39
CCDC94Q9BW85 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
CCDC94Q9BW85 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC94Q9BW85 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CCDC94Q9BW85 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.52■□□□□ 0.39
CCDC94Q9BW85 AC091951.1-201ENST00000512854 2465 ntBASIC17.52■□□□□ 0.39
CCDC94Q9BW85 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 FAM207CP-201ENST00000443486 507 ntBASIC17.51■□□□□ 0.39
CCDC94Q9BW85 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 AC243562.2-201ENST00000561247 970 ntBASIC17.51■□□□□ 0.39
CCDC94Q9BW85 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 LINC02084-201ENST00000606069 1096 ntBASIC17.51■□□□□ 0.39
CCDC94Q9BW85 AL844908.2-201ENST00000609461 460 ntBASIC17.51■□□□□ 0.39
CCDC94Q9BW85 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCDC94Q9BW85 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 AL691432.1-201ENST00000596308 1422 ntBASIC17.5■□□□□ 0.39
CCDC94Q9BW85 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 AC236430.1-201ENST00000402231 743 ntBASIC17.5■□□□□ 0.39
CCDC94Q9BW85 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 MRPS18AP1-201ENST00000414458 589 ntBASIC17.5■□□□□ 0.39
CCDC94Q9BW85 AC002472.2-201ENST00000442739 958 ntBASIC17.5■□□□□ 0.39
CCDC94Q9BW85 AC009477.1-201ENST00000452936 217 ntBASIC17.5■□□□□ 0.39
CCDC94Q9BW85 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 MIR6069-201ENST00000620069 79 ntBASIC17.5■□□□□ 0.39
CCDC94Q9BW85 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 AL033527.5-202ENST00000641632 1098 ntBASIC17.5■□□□□ 0.39
CCDC94Q9BW85 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCDC94Q9BW85 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms