Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.74□□□□□ -0.53
VGLL1Q99990 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
VGLL1Q99990 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC11.74□□□□□ -0.53
VGLL1Q99990 AC087386.2-201ENST00000623212 4637 ntBASIC11.74□□□□□ -0.53
VGLL1Q99990 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
VGLL1Q99990 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.73□□□□□ -0.53
VGLL1Q99990 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VGLL1Q99990 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VGLL1Q99990 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
VGLL1Q99990 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
VGLL1Q99990 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VGLL1Q99990 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 YBX2P1-201ENST00000394192 760 ntBASIC11.73□□□□□ -0.53
VGLL1Q99990 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC11.73□□□□□ -0.53
VGLL1Q99990 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VGLL1Q99990 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
VGLL1Q99990 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.73□□□□□ -0.53
VGLL1Q99990 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC11.73□□□□□ -0.53
VGLL1Q99990 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
VGLL1Q99990 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
VGLL1Q99990 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.73□□□□□ -0.53
VGLL1Q99990 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VGLL1Q99990 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VGLL1Q99990 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC11.72□□□□□ -0.53
VGLL1Q99990 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
VGLL1Q99990 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.72□□□□□ -0.53
VGLL1Q99990 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
VGLL1Q99990 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
VGLL1Q99990 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
VGLL1Q99990 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms