Protein–RNA interactions for Protein: Q99795

GPA33, Cell surface A33 antigen, humanhuman

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33Q99795 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
GPA33Q99795 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.99□□□□□ -0.17
GPA33Q99795 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
GPA33Q99795 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
GPA33Q99795 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.99□□□□□ -0.17
GPA33Q99795 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
GPA33Q99795 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
GPA33Q99795 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
GPA33Q99795 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GPA33Q99795 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.98□□□□□ -0.17
GPA33Q99795 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.98□□□□□ -0.17
GPA33Q99795 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GPA33Q99795 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.98□□□□□ -0.17
GPA33Q99795 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.98□□□□□ -0.17
GPA33Q99795 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
GPA33Q99795 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 TOMM22P5-201ENST00000416399 439 ntBASIC13.98□□□□□ -0.17
GPA33Q99795 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.98□□□□□ -0.17
GPA33Q99795 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.98□□□□□ -0.17
GPA33Q99795 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.98□□□□□ -0.17
GPA33Q99795 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
GPA33Q99795 AC027796.2-201ENST00000575326 344 ntBASIC13.98□□□□□ -0.17
GPA33Q99795 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.98□□□□□ -0.17
GPA33Q99795 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.98□□□□□ -0.17
GPA33Q99795 AL355385.1-201ENST00000606123 409 ntBASIC13.98□□□□□ -0.17
GPA33Q99795 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.98□□□□□ -0.17
GPA33Q99795 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.98□□□□□ -0.17
GPA33Q99795 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.98□□□□□ -0.17
GPA33Q99795 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
GPA33Q99795 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.98□□□□□ -0.17
GPA33Q99795 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
GPA33Q99795 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms