Protein–RNA interactions for Protein: Q96EX2

RNFT2, RING finger and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2Q96EX2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.02□□□□□ -0.16
RNFT2Q96EX2 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RNFT2Q96EX2 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RNFT2Q96EX2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 FAM220BP-201ENST00000377689 816 ntBASIC14.02□□□□□ -0.17
RNFT2Q96EX2 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 AC142381.1-201ENST00000426099 345 ntBASIC14.02□□□□□ -0.17
RNFT2Q96EX2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 AC074386.1-202ENST00000463561 864 ntBASIC14.02□□□□□ -0.17
RNFT2Q96EX2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 AC112191.1-201ENST00000523689 701 ntBASIC14.02□□□□□ -0.17
RNFT2Q96EX2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 Z83851.2-201ENST00000609564 659 ntBASIC14.02□□□□□ -0.17
RNFT2Q96EX2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RNFT2Q96EX2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 AC136604.1-201ENST00000418535 575 ntBASIC14.01□□□□□ -0.17
RNFT2Q96EX2 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 KRT126P-201ENST00000549467 1181 ntBASIC14.01□□□□□ -0.17
RNFT2Q96EX2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 AC064836.3-201ENST00000607928 673 ntBASIC14.01□□□□□ -0.17
RNFT2Q96EX2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 AL691432.3-201ENST00000621860 400 ntBASIC14.01□□□□□ -0.17
RNFT2Q96EX2 AC008267.7-201ENST00000624570 1194 ntBASIC14.01□□□□□ -0.17
RNFT2Q96EX2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 AC041040.2-201ENST00000622926 2899 ntBASIC14.01□□□□□ -0.17
RNFT2Q96EX2 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.01□□□□□ -0.17
RNFT2Q96EX2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RNFT2Q96EX2 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
RNFT2Q96EX2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14□□□□□ -0.17
RNFT2Q96EX2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RNFT2Q96EX2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14□□□□□ -0.17
RNFT2Q96EX2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RNFT2Q96EX2 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RNFT2Q96EX2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14□□□□□ -0.17
RNFT2Q96EX2 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14□□□□□ -0.17
RNFT2Q96EX2 AC026979.3-201ENST00000607315 403 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 135 ms