Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.6□□□□□ -0.23
AP3S1Q92572 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 AP000845.1-201ENST00000581677 2131 ntBASIC13.6□□□□□ -0.23
AP3S1Q92572 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.6□□□□□ -0.23
AP3S1Q92572 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.6□□□□□ -0.23
AP3S1Q92572 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.6□□□□□ -0.23
AP3S1Q92572 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.6□□□□□ -0.23
AP3S1Q92572 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.6□□□□□ -0.23
AP3S1Q92572 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
AP3S1Q92572 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
AP3S1Q92572 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.6□□□□□ -0.23
AP3S1Q92572 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
AP3S1Q92572 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
AP3S1Q92572 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
AP3S1Q92572 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S1Q92572 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
AP3S1Q92572 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.59□□□□□ -0.23
AP3S1Q92572 STRCP1-201ENST00000509801 5328 ntBASIC13.59□□□□□ -0.23
AP3S1Q92572 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 RAB17-203ENST00000409576 466 ntTSL 3 BASIC13.59□□□□□ -0.23
AP3S1Q92572 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.59□□□□□ -0.23
AP3S1Q92572 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
AP3S1Q92572 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S1Q92572 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 CXCL1P1-201ENST00000502804 216 ntBASIC13.59□□□□□ -0.23
AP3S1Q92572 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S1Q92572 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.59□□□□□ -0.23
AP3S1Q92572 AL009183.1-201ENST00000603760 355 ntBASIC13.59□□□□□ -0.23
AP3S1Q92572 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S1Q92572 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
AP3S1Q92572 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
AP3S1Q92572 MIR1199-201ENST00000621445 119 ntBASIC13.59□□□□□ -0.23
AP3S1Q92572 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.59□□□□□ -0.23
AP3S1Q92572 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S1Q92572 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.59□□□□□ -0.23
AP3S1Q92572 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.59□□□□□ -0.23
AP3S1Q92572 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
AP3S1Q92572 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.59□□□□□ -0.23
AP3S1Q92572 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
AP3S1Q92572 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms