Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RTN4IP1Q8WWV3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTN4IP1Q8WWV3 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTN4IP1Q8WWV3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.02□□□□□ -0.32
RTN4IP1Q8WWV3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTN4IP1Q8WWV3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTN4IP1Q8WWV3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RTN4IP1Q8WWV3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.02□□□□□ -0.32
RTN4IP1Q8WWV3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.02□□□□□ -0.32
RTN4IP1Q8WWV3 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RTN4IP1Q8WWV3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 AC026150.2-201ENST00000564693 1156 ntBASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 AC104581.4-201ENST00000623126 3052 ntBASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 WASH3P-207ENST00000560956 1394 ntBASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 FO538757.1-201ENST00000623083 1397 ntBASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 AL136982.4-201ENST00000437689 1740 ntBASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
RTN4IP1Q8WWV3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 AC027612.4-201ENST00000605371 583 ntBASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 AC003101.2-201ENST00000612557 442 ntBASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 AL691403.2-201ENST00000618460 490 ntBASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 AP001059.3-201ENST00000619053 235 ntBASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 CYP4F24P-201ENST00000586049 1580 ntBASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.01□□□□□ -0.33
RTN4IP1Q8WWV3 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms