Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AC093214.1-201ENST00000511688 1107 ntBASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 RNA5SP421-201ENST00000516864 134 ntBASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AC008738.7-201ENST00000609744 511 ntBASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AC004840.1-201ENST00000636359 365 ntBASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TTC9CQ8N5M4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 CICP11-201ENST00000434745 2827 ntBASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 AC087386.2-201ENST00000623212 4637 ntBASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 MECR-202ENST00000373791 2416 ntTSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 AL158212.4-201ENST00000624062 1286 ntBASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.19□□□□□ -0.46
TTC9CQ8N5M4 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms