Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VPS52Q8N1B4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 AC144831.1-201ENST00000573312 2656 ntBASIC16.74■□□□□ 0.27
VPS52Q8N1B4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 AL133338.1-201ENST00000565695 1517 ntBASIC16.74■□□□□ 0.27
VPS52Q8N1B4 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
VPS52Q8N1B4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.73■□□□□ 0.27
VPS52Q8N1B4 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AC244669.2-201ENST00000612320 853 ntBASIC16.73■□□□□ 0.27
VPS52Q8N1B4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 AC069224.1-201ENST00000566372 1715 ntBASIC16.73■□□□□ 0.27
VPS52Q8N1B4 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
VPS52Q8N1B4 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 AC018892.3-201ENST00000623986 2499 ntBASIC16.72■□□□□ 0.27
VPS52Q8N1B4 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VPS52Q8N1B4 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms