Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 AC239868.1-201ENST00000369385 493 ntBASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 RPS9P1-201ENST00000419943 583 ntBASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 AC114501.1-201ENST00000445949 172 ntBASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 AC084781.1-201ENST00000613737 656 ntBASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 AP001065.2-201ENST00000617205 644 ntBASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 AC026691.1-201ENST00000602502 2017 ntBASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 AC074138.1-201ENST00000611182 1303 ntBASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 AC023024.2-201ENST00000623561 1993 ntBASIC14.07□□□□□ -0.16
COL27A1Q8IZC6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AP000356.3-201ENST00000382243 753 ntBASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AL512430.1-201ENST00000392575 860 ntBASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AC007292.2-201ENST00000593524 1812 ntBASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 FAM90A2P-201ENST00000511144 1395 ntBASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 FAM90A25P-201ENST00000528404 1395 ntBASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 DNM1P30-201ENST00000563586 452 ntBASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AC005041.3-201ENST00000606287 649 ntBASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 AC009145.4-201ENST00000625119 1294 ntBASIC14.06□□□□□ -0.16
COL27A1Q8IZC6 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 SALL4P5-201ENST00000419001 1760 ntBASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 ORAOV1P1-201ENST00000503108 395 ntBASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.05□□□□□ -0.16
COL27A1Q8IZC6 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms