Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
CDKL3Q8IVW4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 AL390755.1-201ENST00000623716 2027 ntBASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 SAMD11P1-201ENST00000571429 661 ntBASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 AC106881.1-201ENST00000605849 3329 ntBASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDKL3Q8IVW4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 AC009407.1-201ENST00000568958 598 ntBASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CDKL3Q8IVW4 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms