Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 CICP14-201ENST00000629111 2732 ntBASIC14.25□□□□□ -0.13
VRK2Q86Y07 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 KRT18P28-201ENST00000453838 1332 ntBASIC14.25□□□□□ -0.13
VRK2Q86Y07 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 AC023908.3-201ENST00000564211 3047 ntBASIC14.25□□□□□ -0.13
VRK2Q86Y07 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 ZNF890P-202ENST00000530367 1156 ntBASIC14.25□□□□□ -0.13
VRK2Q86Y07 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK2Q86Y07 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VRK2Q86Y07 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 TSSK5P-201ENST00000423978 907 ntBASIC14.24□□□□□ -0.13
VRK2Q86Y07 FAM8A3P-201ENST00000427218 844 ntBASIC14.24□□□□□ -0.13
VRK2Q86Y07 AC241585.1-201ENST00000433527 519 ntBASIC14.24□□□□□ -0.13
VRK2Q86Y07 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 TIMM17BP1-201ENST00000545713 516 ntBASIC14.24□□□□□ -0.13
VRK2Q86Y07 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.24□□□□□ -0.13
VRK2Q86Y07 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 AC139530.3-201ENST00000620344 690 ntBASIC14.24□□□□□ -0.13
VRK2Q86Y07 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 AC007292.2-201ENST00000593524 1812 ntBASIC14.24□□□□□ -0.13
VRK2Q86Y07 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK2Q86Y07 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.24□□□□□ -0.13
VRK2Q86Y07 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK2Q86Y07 AC012508.2-201ENST00000567613 1472 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms