Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
FOXR1Q6PIV2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
FOXR1Q6PIV2 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.14■□□□□ 0.18
FOXR1Q6PIV2 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 AC026150.2-201ENST00000564693 1156 ntBASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 RN7SL204P-201ENST00000582831 262 ntBASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC16.14■□□□□ 0.17
FOXR1Q6PIV2 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 AC019294.4-201ENST00000561777 2905 ntBASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 GPS2P2-201ENST00000430745 888 ntBASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 AC087641.1-201ENST00000557561 1021 ntBASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 AC005412.3-201ENST00000580309 715 ntBASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
FOXR1Q6PIV2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms