Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PUDPP3-201ENST00000445368 636 ntBASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 AC005324.6-201ENST00000587972 613 ntBASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 AC020922.3-201ENST00000595064 547 ntBASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 AP003680.1-201ENST00000598970 3660 ntBASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 REXO1L5P-201ENST00000622260 2098 ntBASIC14.93□□□□□ -0.02
LYSMD4Q5XG99 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 RN7SKP175-201ENST00000408472 289 ntBASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AC026434.2-201ENST00000506094 1078 ntBASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AC009955.4-201ENST00000597192 544 ntBASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AF254983.2-201ENST00000612331 135 ntBASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AP000346.4-201ENST00000614827 381 ntBASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 NAP1L6-202ENST00000641404 1222 ntBASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD4Q5XG99 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 PCDHA12-202ENST00000613593 2588 ntBASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 AL662844.4-201ENST00000606367 2838 ntBASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD4Q5XG99 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms