Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC22.6■■□□□ 1.21
CDC42BPAQ5VT25 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 RAN-210ENST00000541630 1475 ntTSL 2 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 C18orf15-201ENST00000623680 2534 ntBASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 AL512430.1-201ENST00000392575 860 ntBASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 DNAJB1P1-201ENST00000429417 1024 ntBASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 AC126365.1-201ENST00000578585 1514 ntBASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDC42BPAQ5VT25 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 AP000356.3-201ENST00000382243 753 ntBASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 RPS9P1-201ENST00000419943 583 ntBASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 FAS-202ENST00000352159 1722 ntTSL 5 BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDC42BPAQ5VT25 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42BPAQ5VT25 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42BPAQ5VT25 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDC42BPAQ5VT25 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
CDC42BPAQ5VT25 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 AL583805.1-201ENST00000391389 531 ntBASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 RPL8P2-201ENST00000430538 502 ntBASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 MIR6842-201ENST00000612539 65 ntBASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 AC025262.2-201ENST00000623975 1056 ntBASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 DUTP3-201ENST00000450025 415 ntBASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 FTH1P22-201ENST00000456305 520 ntBASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 CCNC-217ENST00000523985 958 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 AP001065.2-201ENST00000617205 644 ntBASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC22.57■■□□□ 1.2
CDC42BPAQ5VT25 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 RPL13AP19-201ENST00000434320 584 ntBASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 ORAOV1P1-201ENST00000503108 395 ntBASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 MRPL22P1-201ENST00000505398 616 ntBASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDC42BPAQ5VT25 AC027601.3-201ENST00000622907 509 ntBASIC22.56■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms