Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIF1Q5UIP0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 BANF1P3-201ENST00000412556 261 ntBASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 RPL3P5-201ENST00000441645 1232 ntBASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AC004066.1-201ENST00000502488 802 ntBASIC14.65□□□□□ -0.06
RIF1Q5UIP0 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 PGAM1P12-201ENST00000505622 748 ntBASIC14.65□□□□□ -0.06
RIF1Q5UIP0 BCL2L12P1-201ENST00000508390 733 ntBASIC14.65□□□□□ -0.06
RIF1Q5UIP0 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AC004466.1-201ENST00000599515 1080 ntBASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AC144522.1-201ENST00000625111 1658 ntBASIC14.65□□□□□ -0.06
RIF1Q5UIP0 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AC022616.1-201ENST00000518688 554 ntBASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.65□□□□□ -0.06
RIF1Q5UIP0 AC010503.4-201ENST00000615487 688 ntBASIC14.65□□□□□ -0.06
RIF1Q5UIP0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
RIF1Q5UIP0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
RIF1Q5UIP0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 AC092171.3-201ENST00000610122 2651 ntBASIC14.64□□□□□ -0.07
RIF1Q5UIP0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 RPS23-204ENST00000507980 836 ntTSL 2 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 AC005962.1-201ENST00000584100 773 ntBASIC14.64□□□□□ -0.07
RIF1Q5UIP0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 KRT8P31-201ENST00000504812 1408 ntBASIC14.64□□□□□ -0.07
RIF1Q5UIP0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 FRMPD2B-201ENST00000431305 1347 ntBASIC14.64□□□□□ -0.07
RIF1Q5UIP0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 AC106047.2-201ENST00000511723 743 ntBASIC14.64□□□□□ -0.07
RIF1Q5UIP0 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RIF1Q5UIP0 MIR5001-201ENST00000580185 100 ntBASIC14.64□□□□□ -0.07
RIF1Q5UIP0 AC011840.2-201ENST00000563063 1520 ntBASIC14.64□□□□□ -0.07
RIF1Q5UIP0 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
RIF1Q5UIP0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms