Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.71□□□□□ -0.22
ODF4Q2M2E3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ODF4Q2M2E3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 AL359258.3-201ENST00000622910 2331 ntBASIC13.7□□□□□ -0.22
ODF4Q2M2E3 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 AC126335.2-201ENST00000623362 4637 ntBASIC13.7□□□□□ -0.22
ODF4Q2M2E3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 MCCD1P2-201ENST00000423228 335 ntBASIC13.7□□□□□ -0.22
ODF4Q2M2E3 HTR5BP-201ENST00000430851 1154 ntBASIC13.7□□□□□ -0.22
ODF4Q2M2E3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 AC003101.2-201ENST00000612557 442 ntBASIC13.7□□□□□ -0.22
ODF4Q2M2E3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 C20orf181-201ENST00000623918 480 ntBASIC13.7□□□□□ -0.22
ODF4Q2M2E3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 ZBED1P1-201ENST00000502364 1930 ntBASIC13.7□□□□□ -0.22
ODF4Q2M2E3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 AC104581.4-201ENST00000623126 3052 ntBASIC13.7□□□□□ -0.22
ODF4Q2M2E3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ODF4Q2M2E3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 AL353705.2-201ENST00000428243 662 ntBASIC13.69□□□□□ -0.22
ODF4Q2M2E3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 CEND1P1-201ENST00000451006 455 ntBASIC13.69□□□□□ -0.22
ODF4Q2M2E3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
ODF4Q2M2E3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms