Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 AC020658.6-201ENST00000623564 1870 ntBASIC16.1■□□□□ 0.17
IRX4P78413 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 FAM86MP-201ENST00000340703 885 ntBASIC16.1■□□□□ 0.17
IRX4P78413 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
IRX4P78413 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 HAUS4P1-201ENST00000406739 1145 ntBASIC16.1■□□□□ 0.17
IRX4P78413 KRT223P-202ENST00000449164 1292 ntBASIC16.1■□□□□ 0.17
IRX4P78413 SDHAP3-202ENST00000515467 728 ntBASIC16.1■□□□□ 0.17
IRX4P78413 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.1■□□□□ 0.17
IRX4P78413 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
IRX4P78413 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.1■□□□□ 0.17
IRX4P78413 MIR4525-201ENST00000580000 75 ntBASIC16.1■□□□□ 0.17
IRX4P78413 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.1■□□□□ 0.17
IRX4P78413 AC133552.6-201ENST00000613406 534 ntBASIC16.1■□□□□ 0.17
IRX4P78413 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
IRX4P78413 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
IRX4P78413 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.1■□□□□ 0.17
IRX4P78413 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
IRX4P78413 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
IRX4P78413 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
IRX4P78413 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
IRX4P78413 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.09■□□□□ 0.17
IRX4P78413 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.09■□□□□ 0.17
IRX4P78413 AC098850.1-201ENST00000419919 790 ntBASIC16.09■□□□□ 0.17
IRX4P78413 AL589987.1-201ENST00000453380 819 ntBASIC16.09■□□□□ 0.17
IRX4P78413 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 FAM8A2P-201ENST00000528813 1142 ntBASIC16.09■□□□□ 0.17
IRX4P78413 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.09■□□□□ 0.17
IRX4P78413 SNX29P1-201ENST00000548357 1007 ntBASIC16.09■□□□□ 0.17
IRX4P78413 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
IRX4P78413 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.09■□□□□ 0.17
IRX4P78413 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.09■□□□□ 0.17
IRX4P78413 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 KRT8P12-202ENST00000472924 1397 ntBASIC16.09■□□□□ 0.17
IRX4P78413 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
IRX4P78413 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.09■□□□□ 0.17
IRX4P78413 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
IRX4P78413 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
IRX4P78413 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.09■□□□□ 0.17
IRX4P78413 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.09■□□□□ 0.17
IRX4P78413 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.09■□□□□ 0.17
IRX4P78413 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
IRX4P78413 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
IRX4P78413 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
IRX4P78413 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.08■□□□□ 0.17
IRX4P78413 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
IRX4P78413 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IRX4P78413 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IRX4P78413 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.08■□□□□ 0.17
IRX4P78413 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IRX4P78413 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
IRX4P78413 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IRX4P78413 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
IRX4P78413 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.08■□□□□ 0.17
IRX4P78413 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms