Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AL596325.1-201ENST00000563991 1082 ntBASIC14.63□□□□□ -0.07
SKP1P63208 WASH4P-201ENST00000564273 1246 ntBASIC14.63□□□□□ -0.07
SKP1P63208 AC124283.3-201ENST00000570869 594 ntBASIC14.63□□□□□ -0.07
SKP1P63208 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.63□□□□□ -0.07
SKP1P63208 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 WFDC1-204ENST00000613603 549 ntBASIC14.63□□□□□ -0.07
SKP1P63208 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.63□□□□□ -0.07
SKP1P63208 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.63□□□□□ -0.07
SKP1P63208 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.63□□□□□ -0.07
SKP1P63208 AC105233.6-201ENST00000642093 218 ntBASIC14.63□□□□□ -0.07
SKP1P63208 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.63□□□□□ -0.07
SKP1P63208 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.63□□□□□ -0.07
SKP1P63208 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.63□□□□□ -0.07
SKP1P63208 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SKP1P63208 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.62□□□□□ -0.07
SKP1P63208 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SKP1P63208 AC126365.1-201ENST00000578585 1514 ntBASIC14.62□□□□□ -0.07
SKP1P63208 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SKP1P63208 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.62□□□□□ -0.07
SKP1P63208 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SKP1P63208 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 GHSR-202ENST00000427970 912 ntBASIC14.62□□□□□ -0.07
SKP1P63208 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 AC007389.4-201ENST00000454674 793 ntBASIC14.62□□□□□ -0.07
SKP1P63208 GAPDHP40-201ENST00000505218 1006 ntBASIC14.62□□□□□ -0.07
SKP1P63208 KRT18P25-201ENST00000508931 1278 ntBASIC14.62□□□□□ -0.07
SKP1P63208 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.62□□□□□ -0.07
SKP1P63208 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 AC103702.1-201ENST00000548801 2630 ntBASIC14.62□□□□□ -0.07
SKP1P63208 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.62□□□□□ -0.07
SKP1P63208 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.62□□□□□ -0.07
SKP1P63208 AP001063.1-201ENST00000568332 529 ntBASIC14.62□□□□□ -0.07
SKP1P63208 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 CTBP2P3-201ENST00000585629 1255 ntBASIC14.62□□□□□ -0.07
SKP1P63208 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.62□□□□□ -0.07
SKP1P63208 AC015936.2-201ENST00000593177 259 ntBASIC14.62□□□□□ -0.07
SKP1P63208 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.62□□□□□ -0.07
SKP1P63208 AC012645.4-201ENST00000610691 1061 ntBASIC14.62□□□□□ -0.07
SKP1P63208 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
SKP1P63208 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.62□□□□□ -0.07
SKP1P63208 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SKP1P63208 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
SKP1P63208 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 SSR4P1-203ENST00000599569 2260 ntBASIC14.62□□□□□ -0.07
SKP1P63208 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SKP1P63208 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.61□□□□□ -0.07
SKP1P63208 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.61□□□□□ -0.07
SKP1P63208 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.61□□□□□ -0.07
SKP1P63208 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.61□□□□□ -0.07
SKP1P63208 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SKP1P63208 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.61□□□□□ -0.07
SKP1P63208 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SKP1P63208 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.61□□□□□ -0.07
SKP1P63208 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.61□□□□□ -0.07
SKP1P63208 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.61□□□□□ -0.07
SKP1P63208 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.61□□□□□ -0.07
SKP1P63208 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms