Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.64■□□□□ 0.26
SNRPFP62306 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SNRPFP62306 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.64■□□□□ 0.25
SNRPFP62306 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.64■□□□□ 0.25
SNRPFP62306 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.64■□□□□ 0.25
SNRPFP62306 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.64■□□□□ 0.25
SNRPFP62306 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.64■□□□□ 0.25
SNRPFP62306 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.64■□□□□ 0.25
SNRPFP62306 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNRPFP62306 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SNRPFP62306 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.64■□□□□ 0.25
SNRPFP62306 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNRPFP62306 LINC00528-201ENST00000600723 2160 ntBASIC16.64■□□□□ 0.25
SNRPFP62306 AL157414.3-201ENST00000624276 1954 ntBASIC16.64■□□□□ 0.25
SNRPFP62306 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRPFP62306 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SNRPFP62306 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.64■□□□□ 0.25
SNRPFP62306 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.63■□□□□ 0.25
SNRPFP62306 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.63■□□□□ 0.25
SNRPFP62306 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNRPFP62306 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SNRPFP62306 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.63■□□□□ 0.25
SNRPFP62306 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SNRPFP62306 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
SNRPFP62306 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SNRPFP62306 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.63■□□□□ 0.25
SNRPFP62306 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.63■□□□□ 0.25
SNRPFP62306 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SNRPFP62306 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SNRPFP62306 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.63■□□□□ 0.25
SNRPFP62306 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
SNRPFP62306 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRPFP62306 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.63■□□□□ 0.25
SNRPFP62306 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
SNRPFP62306 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.63■□□□□ 0.25
SNRPFP62306 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC16.62■□□□□ 0.25
SNRPFP62306 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.62■□□□□ 0.25
SNRPFP62306 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 AJ011931.1-201ENST00000618749 2492 ntBASIC16.62■□□□□ 0.25
SNRPFP62306 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.62■□□□□ 0.25
SNRPFP62306 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.62■□□□□ 0.25
SNRPFP62306 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.62■□□□□ 0.25
SNRPFP62306 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.62■□□□□ 0.25
SNRPFP62306 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.62■□□□□ 0.25
SNRPFP62306 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SNRPFP62306 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.62■□□□□ 0.25
SNRPFP62306 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SNRPFP62306 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.62■□□□□ 0.25
SNRPFP62306 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.62■□□□□ 0.25
SNRPFP62306 RN7SL752P-201ENST00000463779 287 ntBASIC16.62■□□□□ 0.25
SNRPFP62306 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.62■□□□□ 0.25
SNRPFP62306 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SNRPFP62306 PTP4A1P2-201ENST00000546033 454 ntBASIC16.62■□□□□ 0.25
SNRPFP62306 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SNRPFP62306 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms