Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
SEC61A1P61619 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 HAUS4P1-201ENST00000406739 1145 ntBASIC13.57□□□□□ -0.24
SEC61A1P61619 FAM8A3P-201ENST00000427218 844 ntBASIC13.57□□□□□ -0.24
SEC61A1P61619 AC092580.3-201ENST00000430932 139 ntBASIC13.57□□□□□ -0.24
SEC61A1P61619 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.57□□□□□ -0.24
SEC61A1P61619 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 AC097493.3-201ENST00000509725 367 ntBASIC13.57□□□□□ -0.24
SEC61A1P61619 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
SEC61A1P61619 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.57□□□□□ -0.24
SEC61A1P61619 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.57□□□□□ -0.24
SEC61A1P61619 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.57□□□□□ -0.24
SEC61A1P61619 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 ST20-AS1-201ENST00000560255 4223 ntBASIC13.57□□□□□ -0.24
SEC61A1P61619 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.57□□□□□ -0.24
SEC61A1P61619 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
SEC61A1P61619 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SEC61A1P61619 AC006504.5-208ENST00000588784 2401 ntBASIC13.56□□□□□ -0.24
SEC61A1P61619 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.56□□□□□ -0.24
SEC61A1P61619 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SEC61A1P61619 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
SEC61A1P61619 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.56□□□□□ -0.24
SEC61A1P61619 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 AL589702.1-201ENST00000641229 1509 ntBASIC13.56□□□□□ -0.24
SEC61A1P61619 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.56□□□□□ -0.24
SEC61A1P61619 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.56□□□□□ -0.24
SEC61A1P61619 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.56□□□□□ -0.24
SEC61A1P61619 AL096865.1-201ENST00000606796 927 ntBASIC13.56□□□□□ -0.24
SEC61A1P61619 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 AC007967.4-201ENST00000614700 386 ntBASIC13.56□□□□□ -0.24
SEC61A1P61619 SPDYE12P-201ENST00000618416 771 ntBASIC13.56□□□□□ -0.24
SEC61A1P61619 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SEC61A1P61619 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 FGD5P1-202ENST00000614866 2498 ntBASIC13.56□□□□□ -0.24
SEC61A1P61619 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.56□□□□□ -0.24
SEC61A1P61619 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms