Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CHKAP35790 AC023024.2-201ENST00000623561 1993 ntBASIC16.26■□□□□ 0.19
CHKAP35790 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CHKAP35790 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CHKAP35790 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 AC007686.3-201ENST00000619017 3487 ntBASIC16.25■□□□□ 0.19
CHKAP35790 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 AC013726.1-201ENST00000563747 2285 ntBASIC16.25■□□□□ 0.19
CHKAP35790 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 AC007292.2-201ENST00000593524 1812 ntBASIC16.25■□□□□ 0.19
CHKAP35790 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 GK-202ENST00000378941 458 ntTSL 3 BASIC16.25■□□□□ 0.19
CHKAP35790 KRT18P64-201ENST00000434946 1219 ntBASIC16.25■□□□□ 0.19
CHKAP35790 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 RPL13AP25-201ENST00000484130 612 ntBASIC16.25■□□□□ 0.19
CHKAP35790 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.25■□□□□ 0.19
CHKAP35790 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.25■□□□□ 0.19
CHKAP35790 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.25■□□□□ 0.19
CHKAP35790 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.25■□□□□ 0.19
CHKAP35790 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CHKAP35790 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
CHKAP35790 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CHKAP35790 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CHKAP35790 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.24■□□□□ 0.19
CHKAP35790 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.24■□□□□ 0.19
CHKAP35790 AC148477.4-201ENST00000613430 1793 ntBASIC16.24■□□□□ 0.19
CHKAP35790 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
CHKAP35790 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
CHKAP35790 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHKAP35790 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.24■□□□□ 0.19
CHKAP35790 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.24■□□□□ 0.19
CHKAP35790 FAM86LP-201ENST00000478302 853 ntBASIC16.24■□□□□ 0.19
CHKAP35790 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.24■□□□□ 0.19
CHKAP35790 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.24■□□□□ 0.19
CHKAP35790 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CHKAP35790 WFDC1-204ENST00000613603 549 ntBASIC16.24■□□□□ 0.19
CHKAP35790 AL033527.5-201ENST00000641382 801 ntBASIC16.24■□□□□ 0.19
CHKAP35790 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CHKAP35790 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHKAP35790 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CHKAP35790 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.24■□□□□ 0.19
CHKAP35790 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CHKAP35790 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CHKAP35790 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CHKAP35790 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms