Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC8P31273 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.48■□□□□ 0.23
HOXC8P31273 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HOXC8P31273 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC8P31273 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HOXC8P31273 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HOXC8P31273 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.48■□□□□ 0.23
HOXC8P31273 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC8P31273 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC8P31273 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.48■□□□□ 0.23
HOXC8P31273 AC012441.2-201ENST00000444843 739 ntBASIC16.48■□□□□ 0.23
HOXC8P31273 AC134698.3-201ENST00000523880 214 ntBASIC16.48■□□□□ 0.23
HOXC8P31273 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.48■□□□□ 0.23
HOXC8P31273 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.48■□□□□ 0.23
HOXC8P31273 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.48■□□□□ 0.23
HOXC8P31273 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.48■□□□□ 0.23
HOXC8P31273 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC8P31273 AC126365.1-201ENST00000578585 1514 ntBASIC16.48■□□□□ 0.23
HOXC8P31273 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.48■□□□□ 0.23
HOXC8P31273 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HOXC8P31273 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 AC087481.3-201ENST00000602886 1894 ntBASIC16.48■□□□□ 0.23
HOXC8P31273 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.48■□□□□ 0.23
HOXC8P31273 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HOXC8P31273 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HOXC8P31273 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.47■□□□□ 0.23
HOXC8P31273 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HOXC8P31273 Z97180.1-201ENST00000445173 988 ntBASIC16.47■□□□□ 0.23
HOXC8P31273 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.47■□□□□ 0.23
HOXC8P31273 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.47■□□□□ 0.23
HOXC8P31273 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.47■□□□□ 0.23
HOXC8P31273 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.47■□□□□ 0.23
HOXC8P31273 AC103988.2-201ENST00000561804 725 ntBASIC16.47■□□□□ 0.23
HOXC8P31273 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 MIR3907-201ENST00000579424 151 ntBASIC16.47■□□□□ 0.23
HOXC8P31273 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.47■□□□□ 0.23
HOXC8P31273 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HOXC8P31273 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HOXC8P31273 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.47■□□□□ 0.23
HOXC8P31273 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 AL008718.2-201ENST00000609206 1313 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HOXC8P31273 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXC8P31273 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 DOC2GP-204ENST00000639052 2548 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXC8P31273 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HOXC8P31273 RN7SKP214-201ENST00000364208 315 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.46■□□□□ 0.23
HOXC8P31273 AC007274.2-201ENST00000421675 662 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 AC006335.1-201ENST00000445200 547 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 MAGEA5-201ENST00000446757 942 ntBASIC16.46■□□□□ 0.23
HOXC8P31273 AC012618.1-201ENST00000461223 412 ntBASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms