Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.48■□□□□ 0.39
CNGA1P29973 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.48■□□□□ 0.39
CNGA1P29973 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC17.48■□□□□ 0.39
CNGA1P29973 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.48■□□□□ 0.39
CNGA1P29973 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.48■□□□□ 0.39
CNGA1P29973 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.48■□□□□ 0.39
CNGA1P29973 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.48■□□□□ 0.39
CNGA1P29973 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.48■□□□□ 0.39
CNGA1P29973 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.48■□□□□ 0.39
CNGA1P29973 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.48■□□□□ 0.39
CNGA1P29973 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.48■□□□□ 0.39
CNGA1P29973 AL451050.2-201ENST00000606967 682 ntBASIC17.48■□□□□ 0.39
CNGA1P29973 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 AC015967.2-201ENST00000624092 234 ntBASIC17.48■□□□□ 0.39
CNGA1P29973 AC006435.4-201ENST00000625037 234 ntBASIC17.48■□□□□ 0.39
CNGA1P29973 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.48■□□□□ 0.39
CNGA1P29973 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.48■□□□□ 0.39
CNGA1P29973 AL356737.1-201ENST00000634391 234 ntBASIC17.48■□□□□ 0.39
CNGA1P29973 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.48■□□□□ 0.39
CNGA1P29973 AP003680.1-201ENST00000598970 3660 ntBASIC17.48■□□□□ 0.39
CNGA1P29973 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNGA1P29973 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
CNGA1P29973 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CNGA1P29973 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CNGA1P29973 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CNGA1P29973 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.48■□□□□ 0.39
CNGA1P29973 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.47■□□□□ 0.39
CNGA1P29973 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.47■□□□□ 0.39
CNGA1P29973 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
CNGA1P29973 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.47■□□□□ 0.39
CNGA1P29973 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.47■□□□□ 0.39
CNGA1P29973 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.47■□□□□ 0.39
CNGA1P29973 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.47■□□□□ 0.39
CNGA1P29973 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 AC105129.2-201ENST00000559536 390 ntBASIC17.47■□□□□ 0.39
CNGA1P29973 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC17.47■□□□□ 0.39
CNGA1P29973 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.47■□□□□ 0.39
CNGA1P29973 HCG18-245ENST00000602550 559 ntTSL 4 BASIC17.47■□□□□ 0.39
CNGA1P29973 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.47■□□□□ 0.39
CNGA1P29973 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.47■□□□□ 0.39
CNGA1P29973 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CNGA1P29973 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.47■□□□□ 0.39
CNGA1P29973 AC008741.2-201ENST00000612792 3115 ntBASIC17.47■□□□□ 0.39
CNGA1P29973 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CNGA1P29973 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
CNGA1P29973 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.47■□□□□ 0.39
CNGA1P29973 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.47■□□□□ 0.39
CNGA1P29973 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.47■□□□□ 0.39
CNGA1P29973 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CNGA1P29973 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.46■□□□□ 0.39
CNGA1P29973 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CNGA1P29973 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.46■□□□□ 0.39
CNGA1P29973 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.46■□□□□ 0.39
CNGA1P29973 CD8B2-202ENST00000417670 633 ntBASIC17.46■□□□□ 0.39
CNGA1P29973 NUS1P3-201ENST00000423502 862 ntBASIC17.46■□□□□ 0.39
CNGA1P29973 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.46■□□□□ 0.39
CNGA1P29973 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.46■□□□□ 0.39
CNGA1P29973 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CNGA1P29973 GAPDHP40-201ENST00000505218 1006 ntBASIC17.46■□□□□ 0.39
CNGA1P29973 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CNGA1P29973 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC17.46■□□□□ 0.39
CNGA1P29973 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.46■□□□□ 0.39
CNGA1P29973 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.46■□□□□ 0.39
CNGA1P29973 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.46■□□□□ 0.39
CNGA1P29973 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
CNGA1P29973 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms