Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
SHC1P29353 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.16□□□□□ -0.14
SHC1P29353 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.16□□□□□ -0.14
SHC1P29353 AC023310.3-201ENST00000557027 670 ntBASIC14.16□□□□□ -0.14
SHC1P29353 AC100756.1-201ENST00000562736 682 ntBASIC14.16□□□□□ -0.14
SHC1P29353 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 AC138749.3-201ENST00000567691 622 ntBASIC14.16□□□□□ -0.14
SHC1P29353 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.16□□□□□ -0.14
SHC1P29353 AC092364.2-202ENST00000597012 1073 ntBASIC14.16□□□□□ -0.14
SHC1P29353 AC116165.1-201ENST00000611806 668 ntBASIC14.16□□□□□ -0.14
SHC1P29353 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 OR2I1P-210ENST00000642037 4691 ntBASIC14.16□□□□□ -0.14
SHC1P29353 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.16□□□□□ -0.14
SHC1P29353 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SHC1P29353 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SHC1P29353 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SHC1P29353 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.15□□□□□ -0.14
SHC1P29353 FAM207CP-201ENST00000443486 507 ntBASIC14.15□□□□□ -0.14
SHC1P29353 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.15□□□□□ -0.14
SHC1P29353 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.15□□□□□ -0.14
SHC1P29353 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 TIMM17BP1-201ENST00000545713 516 ntBASIC14.15□□□□□ -0.14
SHC1P29353 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.15□□□□□ -0.14
SHC1P29353 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.15□□□□□ -0.14
SHC1P29353 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.15□□□□□ -0.14
SHC1P29353 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 AC009118.2-201ENST00000613275 655 ntBASIC14.15□□□□□ -0.14
SHC1P29353 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
SHC1P29353 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
SHC1P29353 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SHC1P29353 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 LINC00552-201ENST00000625151 2579 ntBASIC14.15□□□□□ -0.14
SHC1P29353 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.15□□□□□ -0.14
SHC1P29353 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SHC1P29353 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms