Protein–RNA interactions for Protein: P14867

GABRA1, Gamma-aminobutyric acid receptor subunit alpha-1, humanhuman

Predictions only

Length 456 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1P14867 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABRA1P14867 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
GABRA1P14867 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GABRA1P14867 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 AL133267.1-201ENST00000398220 340 ntBASIC14.03□□□□□ -0.16
GABRA1P14867 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 KRT18P64-201ENST00000434946 1219 ntBASIC14.03□□□□□ -0.16
GABRA1P14867 RPS2P32-201ENST00000439199 892 ntBASIC14.03□□□□□ -0.16
GABRA1P14867 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA1P14867 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 TDH-203ENST00000531764 1110 ntBASIC14.03□□□□□ -0.16
GABRA1P14867 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 AC009486.1-201ENST00000569860 813 ntBASIC14.03□□□□□ -0.16
GABRA1P14867 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.03□□□□□ -0.16
GABRA1P14867 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 AC133552.6-201ENST00000613406 534 ntBASIC14.03□□□□□ -0.16
GABRA1P14867 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA1P14867 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 GRK6P1-201ENST00000400595 1711 ntBASIC14.03□□□□□ -0.16
GABRA1P14867 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA1P14867 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA1P14867 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA1P14867 AC136621.1-201ENST00000624017 2304 ntBASIC14.03□□□□□ -0.16
GABRA1P14867 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.03□□□□□ -0.16
GABRA1P14867 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABRA1P14867 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
GABRA1P14867 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
GABRA1P14867 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.02□□□□□ -0.16
GABRA1P14867 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
GABRA1P14867 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRA1P14867 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRA1P14867 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
GABRA1P14867 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRA1P14867 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 C8orf49-201ENST00000525043 1968 ntBASIC14.02□□□□□ -0.16
GABRA1P14867 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRA1P14867 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
GABRA1P14867 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.02□□□□□ -0.16
GABRA1P14867 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
GABRA1P14867 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.02□□□□□ -0.16
GABRA1P14867 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABRA1P14867 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA1P14867 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA1P14867 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
GABRA1P14867 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA1P14867 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA1P14867 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.02□□□□□ -0.17
GABRA1P14867 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.02□□□□□ -0.17
GABRA1P14867 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA1P14867 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
GABRA1P14867 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
GABRA1P14867 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.02□□□□□ -0.17
GABRA1P14867 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA1P14867 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.02□□□□□ -0.17
GABRA1P14867 SLC25A47P1-201ENST00000531577 414 ntBASIC14.02□□□□□ -0.17
GABRA1P14867 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms