Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC245100.3-201ENST00000441281 285 ntBASIC14.97□□□□□ -0.01
LDLRP01130 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 AC093724.1-201ENST00000448659 1027 ntBASIC14.97□□□□□ -0.01
LDLRP01130 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LDLRP01130 AC109635.5-201ENST00000533593 962 ntBASIC14.97□□□□□ -0.01
LDLRP01130 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.97□□□□□ -0.01
LDLRP01130 HILS1-202ENST00000545329 423 ntBASIC14.97□□□□□ -0.01
LDLRP01130 AP000842.3-202ENST00000569238 1080 ntBASIC14.97□□□□□ -0.01
LDLRP01130 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LDLRP01130 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.97□□□□□ -0.01
LDLRP01130 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.97□□□□□ -0.01
LDLRP01130 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.97□□□□□ -0.01
LDLRP01130 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.97□□□□□ -0.01
LDLRP01130 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 AC008267.7-201ENST00000624570 1194 ntBASIC14.97□□□□□ -0.01
LDLRP01130 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.97□□□□□ -0.01
LDLRP01130 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.97□□□□□ -0.01
LDLRP01130 WASH6P-202ENST00000359512 1437 ntBASIC14.97□□□□□ -0.01
LDLRP01130 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 AC005912.2-201ENST00000619492 2400 ntBASIC14.97□□□□□ -0.01
LDLRP01130 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.97□□□□□ -0.01
LDLRP01130 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LDLRP01130 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LDLRP01130 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LDLRP01130 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.96□□□□□ -0.01
LDLRP01130 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LDLRP01130 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LDLRP01130 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 MIR346-201ENST00000362234 95 ntBASIC14.96□□□□□ -0.01
LDLRP01130 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.96□□□□□ -0.01
LDLRP01130 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.96□□□□□ -0.01
LDLRP01130 TP53TG3HP-202ENST00000569755 579 ntBASIC14.96□□□□□ -0.01
LDLRP01130 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.96□□□□□ -0.01
LDLRP01130 AC104581.4-201ENST00000623126 3052 ntBASIC14.96□□□□□ -0.01
LDLRP01130 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LDLRP01130 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.96□□□□□ -0.01
LDLRP01130 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LDLRP01130 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LDLRP01130 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
LDLRP01130 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LDLRP01130 ST20-AS1-201ENST00000560255 4223 ntBASIC14.96□□□□□ -0.02
LDLRP01130 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.95□□□□□ -0.02
LDLRP01130 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LDLRP01130 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.95□□□□□ -0.02
LDLRP01130 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 AC134407.2-201ENST00000625089 1978 ntBASIC14.95□□□□□ -0.02
LDLRP01130 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LDLRP01130 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.95□□□□□ -0.02
LDLRP01130 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
LDLRP01130 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
LDLRP01130 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.95□□□□□ -0.02
LDLRP01130 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.95□□□□□ -0.02
LDLRP01130 RNU1-129P-201ENST00000384064 167 ntBASIC14.95□□□□□ -0.02
LDLRP01130 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LDLRP01130 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.95□□□□□ -0.02
LDLRP01130 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.95□□□□□ -0.02
LDLRP01130 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.95□□□□□ -0.02
LDLRP01130 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms