Protein–RNA interactions for Protein: O75449

KATNA1, Katanin p60 ATPase-containing subunit A1, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1O75449 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
KATNA1O75449 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 TCAF2P1-201ENST00000291129 2421 ntBASIC15.28■□□□□ 0.04
KATNA1O75449 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.28■□□□□ 0.04
KATNA1O75449 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
KATNA1O75449 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.28■□□□□ 0.04
KATNA1O75449 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 AC087499.6-201ENST00000411576 835 ntBASIC15.28■□□□□ 0.04
KATNA1O75449 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.28■□□□□ 0.04
KATNA1O75449 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.28■□□□□ 0.04
KATNA1O75449 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 DOC2GP-202ENST00000514950 1163 ntBASIC15.28■□□□□ 0.04
KATNA1O75449 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.28■□□□□ 0.04
KATNA1O75449 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 MIR6069-201ENST00000620069 79 ntBASIC15.28■□□□□ 0.04
KATNA1O75449 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.28■□□□□ 0.04
KATNA1O75449 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
KATNA1O75449 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
KATNA1O75449 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
KATNA1O75449 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.28■□□□□ 0.04
KATNA1O75449 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KATNA1O75449 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.27■□□□□ 0.04
KATNA1O75449 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.27■□□□□ 0.04
KATNA1O75449 BTBD7P1-201ENST00000447253 1453 ntBASIC15.27■□□□□ 0.04
KATNA1O75449 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.27■□□□□ 0.04
KATNA1O75449 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
KATNA1O75449 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.27■□□□□ 0.04
KATNA1O75449 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.27■□□□□ 0.04
KATNA1O75449 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.27■□□□□ 0.04
KATNA1O75449 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
KATNA1O75449 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 RPL5P21-201ENST00000404620 815 ntBASIC15.27■□□□□ 0.04
KATNA1O75449 HIST3H2BA-201ENST00000436555 524 ntBASIC15.27■□□□□ 0.04
KATNA1O75449 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.27■□□□□ 0.04
KATNA1O75449 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.27■□□□□ 0.04
KATNA1O75449 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.27■□□□□ 0.04
KATNA1O75449 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
KATNA1O75449 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
KATNA1O75449 AL512361.1-201ENST00000554200 418 ntBASIC15.27■□□□□ 0.04
KATNA1O75449 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.27■□□□□ 0.04
KATNA1O75449 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.27■□□□□ 0.04
KATNA1O75449 AL359881.2-201ENST00000602973 570 ntBASIC15.27■□□□□ 0.04
KATNA1O75449 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.27■□□□□ 0.04
KATNA1O75449 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.27■□□□□ 0.04
KATNA1O75449 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KATNA1O75449 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.27■□□□□ 0.03
KATNA1O75449 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KATNA1O75449 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KATNA1O75449 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KATNA1O75449 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KATNA1O75449 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
KATNA1O75449 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.27■□□□□ 0.03
KATNA1O75449 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
KATNA1O75449 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.27■□□□□ 0.03
KATNA1O75449 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
KATNA1O75449 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KATNA1O75449 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms