Protein–RNA interactions for Protein: O60682

MSC, Musculin, humanhuman

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSCO60682 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.11■□□□□ 0.33
MSCO60682 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.11■□□□□ 0.33
MSCO60682 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC17.11■□□□□ 0.33
MSCO60682 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.11■□□□□ 0.33
MSCO60682 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.11■□□□□ 0.33
MSCO60682 AL136295.7-201ENST00000619226 1200 ntBASIC17.11■□□□□ 0.33
MSCO60682 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 AL805961.1-203ENST00000641078 1258 ntBASIC17.11■□□□□ 0.33
MSCO60682 AC004923.1-202ENST00000642106 209 ntBASIC17.11■□□□□ 0.33
MSCO60682 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.11■□□□□ 0.33
MSCO60682 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC17.11■□□□□ 0.33
MSCO60682 AC092978.1-202ENST00000637590 1327 ntBASIC17.11■□□□□ 0.33
MSCO60682 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.11■□□□□ 0.33
MSCO60682 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSCO60682 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
MSCO60682 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
MSCO60682 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.1■□□□□ 0.33
MSCO60682 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC17.1■□□□□ 0.33
MSCO60682 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.1■□□□□ 0.33
MSCO60682 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.1■□□□□ 0.33
MSCO60682 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.1■□□□□ 0.33
MSCO60682 AP003171.2-201ENST00000528208 925 ntBASIC17.1■□□□□ 0.33
MSCO60682 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 CENPX-208ENST00000584347 799 ntTSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.1■□□□□ 0.33
MSCO60682 AC006480.2-201ENST00000609770 1337 ntBASIC17.1■□□□□ 0.33
MSCO60682 AC008894.3-201ENST00000624324 3103 ntBASIC17.1■□□□□ 0.33
MSCO60682 AC009090.5-201ENST00000624886 2285 ntBASIC17.1■□□□□ 0.33
MSCO60682 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
MSCO60682 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.1■□□□□ 0.33
MSCO60682 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.1■□□□□ 0.33
MSCO60682 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 AC022188.1-201ENST00000620960 1664 ntBASIC17.1■□□□□ 0.33
MSCO60682 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
MSCO60682 AL139384.1-201ENST00000612143 3047 ntBASIC17.1■□□□□ 0.33
MSCO60682 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.09■□□□□ 0.33
MSCO60682 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.09■□□□□ 0.33
MSCO60682 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
MSCO60682 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.09■□□□□ 0.33
MSCO60682 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.09■□□□□ 0.33
MSCO60682 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
MSCO60682 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.09■□□□□ 0.33
MSCO60682 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.09■□□□□ 0.33
MSCO60682 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 AL353637.1-201ENST00000451571 732 ntBASIC17.09■□□□□ 0.33
MSCO60682 AC234782.1-201ENST00000451950 919 ntBASIC17.09■□□□□ 0.33
MSCO60682 AC012618.1-201ENST00000461223 412 ntBASIC17.09■□□□□ 0.33
MSCO60682 MARK2P5-201ENST00000507649 634 ntBASIC17.09■□□□□ 0.33
MSCO60682 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.09■□□□□ 0.33
MSCO60682 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC17.09■□□□□ 0.33
MSCO60682 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC17.09■□□□□ 0.33
MSCO60682 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.09■□□□□ 0.33
MSCO60682 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.09■□□□□ 0.33
MSCO60682 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
MSCO60682 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC17.09■□□□□ 0.33
MSCO60682 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
MSCO60682 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms