Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.26■□□□□ 0.35
ACTN4O43707 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.26■□□□□ 0.35
ACTN4O43707 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.26■□□□□ 0.35
ACTN4O43707 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.26■□□□□ 0.35
ACTN4O43707 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.26■□□□□ 0.35
ACTN4O43707 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
ACTN4O43707 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
ACTN4O43707 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.26■□□□□ 0.35
ACTN4O43707 SAMD11P1-201ENST00000571429 661 ntBASIC17.26■□□□□ 0.35
ACTN4O43707 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC17.26■□□□□ 0.35
ACTN4O43707 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.26■□□□□ 0.35
ACTN4O43707 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
ACTN4O43707 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.26■□□□□ 0.35
ACTN4O43707 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC17.26■□□□□ 0.35
ACTN4O43707 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.26■□□□□ 0.35
ACTN4O43707 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.26■□□□□ 0.35
ACTN4O43707 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ACTN4O43707 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ACTN4O43707 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ACTN4O43707 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.25■□□□□ 0.35
ACTN4O43707 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.25■□□□□ 0.35
ACTN4O43707 BTBD7P1-201ENST00000447253 1453 ntBASIC17.25■□□□□ 0.35
ACTN4O43707 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 AC007686.3-201ENST00000619017 3487 ntBASIC17.25■□□□□ 0.35
ACTN4O43707 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ACTN4O43707 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.25■□□□□ 0.35
ACTN4O43707 AC004890.2-204ENST00000481968 304 ntBASIC17.25■□□□□ 0.35
ACTN4O43707 MEIS3P1-201ENST00000495167 958 ntBASIC17.25■□□□□ 0.35
ACTN4O43707 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.25■□□□□ 0.35
ACTN4O43707 TIMM17BP1-201ENST00000545713 516 ntBASIC17.25■□□□□ 0.35
ACTN4O43707 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
ACTN4O43707 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.25■□□□□ 0.35
ACTN4O43707 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ACTN4O43707 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ACTN4O43707 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.25■□□□□ 0.35
ACTN4O43707 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ACTN4O43707 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.24■□□□□ 0.35
ACTN4O43707 MTHFR-210ENST00000641407 2387 ntBASIC17.24■□□□□ 0.35
ACTN4O43707 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.24■□□□□ 0.35
ACTN4O43707 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.24■□□□□ 0.35
ACTN4O43707 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.24■□□□□ 0.35
ACTN4O43707 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.24■□□□□ 0.35
ACTN4O43707 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC17.24■□□□□ 0.35
ACTN4O43707 IGHV3-42-201ENST00000520410 361 ntBASIC17.24■□□□□ 0.35
ACTN4O43707 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.24■□□□□ 0.35
ACTN4O43707 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.24■□□□□ 0.35
ACTN4O43707 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ACTN4O43707 SRD5A3P1-201ENST00000603021 949 ntBASIC17.24■□□□□ 0.35
ACTN4O43707 AL390955.2-201ENST00000603032 514 ntBASIC17.24■□□□□ 0.35
ACTN4O43707 AL390754.1-201ENST00000619088 582 ntBASIC17.24■□□□□ 0.35
ACTN4O43707 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ACTN4O43707 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
ACTN4O43707 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC17.24■□□□□ 0.35
ACTN4O43707 SNX18-202ENST00000343017 3140 ntBASIC17.24■□□□□ 0.35
ACTN4O43707 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.24■□□□□ 0.35
ACTN4O43707 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ACTN4O43707 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms