Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC023157.3-201ENST00000619086 2088 ntBASIC13.71□□□□□ -0.21
SGCEO43556 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.71□□□□□ -0.22
SGCEO43556 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
SGCEO43556 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.71□□□□□ -0.22
SGCEO43556 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SGCEO43556 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.71□□□□□ -0.22
SGCEO43556 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SGCEO43556 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.7□□□□□ -0.22
SGCEO43556 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
SGCEO43556 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SGCEO43556 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
SGCEO43556 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.7□□□□□ -0.22
SGCEO43556 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SGCEO43556 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.7□□□□□ -0.22
SGCEO43556 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.7□□□□□ -0.22
SGCEO43556 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.7□□□□□ -0.22
SGCEO43556 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.7□□□□□ -0.22
SGCEO43556 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.7□□□□□ -0.22
SGCEO43556 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
SGCEO43556 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.7□□□□□ -0.22
SGCEO43556 AL590560.3-201ENST00000623350 461 ntBASIC13.7□□□□□ -0.22
SGCEO43556 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.7□□□□□ -0.22
SGCEO43556 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SGCEO43556 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SGCEO43556 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.7□□□□□ -0.22
SGCEO43556 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SGCEO43556 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 CICP20-201ENST00000443330 2801 ntBASIC13.69□□□□□ -0.22
SGCEO43556 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.69□□□□□ -0.22
SGCEO43556 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.69□□□□□ -0.22
SGCEO43556 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.69□□□□□ -0.22
SGCEO43556 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SGCEO43556 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.69□□□□□ -0.22
SGCEO43556 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.69□□□□□ -0.22
SGCEO43556 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 RPL5P21-201ENST00000404620 815 ntBASIC13.69□□□□□ -0.22
SGCEO43556 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.69□□□□□ -0.22
SGCEO43556 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.69□□□□□ -0.22
SGCEO43556 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.69□□□□□ -0.22
SGCEO43556 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.69□□□□□ -0.22
SGCEO43556 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.69□□□□□ -0.22
SGCEO43556 AC015922.1-201ENST00000421102 1152 ntBASIC13.69□□□□□ -0.22
SGCEO43556 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SGCEO43556 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC13.69□□□□□ -0.22
SGCEO43556 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.69□□□□□ -0.22
SGCEO43556 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms