Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
FOXN1O15353 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
FOXN1O15353 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXN1O15353 DIO1-215ENST00000610607 796 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXN1O15353 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC18.31■□□□□ 0.52
FOXN1O15353 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXN1O15353 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXN1O15353 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.31■□□□□ 0.52
FOXN1O15353 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
FOXN1O15353 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
FOXN1O15353 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXN1O15353 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 AC025271.4-201ENST00000621477 1726 ntBASIC18.3■□□□□ 0.52
FOXN1O15353 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXN1O15353 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 AL512430.1-201ENST00000392575 860 ntBASIC18.3■□□□□ 0.52
FOXN1O15353 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.3■□□□□ 0.52
FOXN1O15353 ACTG1P2-201ENST00000415776 1125 ntBASIC18.3■□□□□ 0.52
FOXN1O15353 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXN1O15353 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC18.3■□□□□ 0.52
FOXN1O15353 ACTG1P11-201ENST00000425411 1125 ntBASIC18.3■□□□□ 0.52
FOXN1O15353 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
FOXN1O15353 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXN1O15353 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC18.3■□□□□ 0.52
FOXN1O15353 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FOXN1O15353 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
FOXN1O15353 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
FOXN1O15353 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
FOXN1O15353 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXN1O15353 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
FOXN1O15353 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 AC073347.1-201ENST00000421633 2643 ntBASIC18.29■□□□□ 0.52
FOXN1O15353 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXN1O15353 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FOXN1O15353 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXN1O15353 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXN1O15353 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXN1O15353 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
FOXN1O15353 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 CRCP-204ENST00000398684 492 ntTSL 2 BASIC18.29■□□□□ 0.52
FOXN1O15353 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.29■□□□□ 0.52
FOXN1O15353 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.29■□□□□ 0.52
FOXN1O15353 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.29■□□□□ 0.52
FOXN1O15353 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXN1O15353 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC18.29■□□□□ 0.52
FOXN1O15353 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXN1O15353 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
FOXN1O15353 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
FOXN1O15353 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
FOXN1O15353 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.29■□□□□ 0.52
FOXN1O15353 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
FOXN1O15353 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXN1O15353 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXN1O15353 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms