Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.18■□□□□ 0.02
SATB2Q9UPW6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SATB2Q9UPW6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SATB2Q9UPW6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SATB2Q9UPW6 TUBB1P2-201ENST00000422712 1306 ntBASIC15.17■□□□□ 0.02
SATB2Q9UPW6 TUBB1P1-201ENST00000503144 1300 ntBASIC15.17■□□□□ 0.02
SATB2Q9UPW6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 CICP13-201ENST00000422015 2789 ntBASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AC132872.4-202ENST00000622924 2756 ntBASIC15.17■□□□□ 0.02
SATB2Q9UPW6 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.17■□□□□ 0.02
SATB2Q9UPW6 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AC004987.2-201ENST00000395959 1148 ntBASIC15.17■□□□□ 0.02
SATB2Q9UPW6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 BCYRN1-201ENST00000418539 200 ntBASIC15.17■□□□□ 0.02
SATB2Q9UPW6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 RPL13P2-201ENST00000440687 659 ntBASIC15.17■□□□□ 0.02
SATB2Q9UPW6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AC245100.5-201ENST00000452108 331 ntBASIC15.17■□□□□ 0.02
SATB2Q9UPW6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.17■□□□□ 0.02
SATB2Q9UPW6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 PTP4A1P2-201ENST00000546033 454 ntBASIC15.16■□□□□ 0.02
SATB2Q9UPW6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 BRI3BPP1-201ENST00000594224 787 ntBASIC15.16■□□□□ 0.02
SATB2Q9UPW6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC15.16■□□□□ 0.02
SATB2Q9UPW6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms