Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC022145.2-201ENST00000598203 171 ntBASIC13.8□□□□□ -0.2
COPS3Q9UNS2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.8□□□□□ -0.2
COPS3Q9UNS2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 SPDYE17-201ENST00000412399 783 ntBASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AC004832.2-201ENST00000426397 482 ntBASIC13.79□□□□□ -0.2
COPS3Q9UNS2 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 POLD2P1-201ENST00000511220 997 ntBASIC13.79□□□□□ -0.2
COPS3Q9UNS2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AL133215.2-201ENST00000609242 977 ntBASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AC018529.1-201ENST00000613063 361 ntBASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AC105339.1-204ENST00000636249 355 ntBASIC13.79□□□□□ -0.2
COPS3Q9UNS2 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 REXO1L2P-201ENST00000425429 2069 ntBASIC13.79□□□□□ -0.2
COPS3Q9UNS2 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.79□□□□□ -0.2
COPS3Q9UNS2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
COPS3Q9UNS2 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
COPS3Q9UNS2 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms